Xinyu Yuan
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The paper introduces a unified framework to fairly evaluate LLM agentic capabilities by standardizing diverse benchmarks and separating the effects of the LLM model from the surrounding framework and environment.
The paper introduces CORE, a contrastive evidence organization method, which significantly improves the accuracy of LLM-based predictions of gene expression changes following cellular perturbations by reframing the task as a comparison between related conditions.
Papers
Plausibility Is Not Prediction: Contrastive Evidence for LLM-Based Cellular Perturbation Reasoning
Xinyu Yuan, Xixian Liu, Jianan Zhao, Yashi Zhang +2 more
The paper introduces CORE, a contrastive evidence organization method, which significantly improves the accuracy of LLM-based predictions of gene expression changes following cellular perturbations by…