Yao Chen
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This paper demonstrates that Large Language Models (LLMs) can serve as accurate and selective surrogates for costly GPU kernel performance measurements, significantly expanding the search space for optimizing deep learning kernels.
The paper proposes MADS, a Model-Aware Diverse Core Set Selection method that uses LLM internal activation states to select a small, diverse core set of instructions, significantly improving model performance while reducing data requirements.
The paper introduces SGAP-PPIS, a structure-guided adaptive propagation model that improves protein-protein interaction site prediction by allowing information diffusion to adapt based on a residue's local geometric environment.
Papers
Structure-Guided Adaptive Propagation for Protein-Protein Interaction Site Prediction
Enqiang Zhu, Yizi Liu, Yilong Luo, Yao Chen +2 more
The paper introduces SGAP-PPIS, a structure-guided adaptive propagation model that improves protein-protein interaction site prediction by allowing information diffusion to adapt based on a residue's…